"The red eyes are not just inside, her whole eyes get puffy and red on the outside. This should clear up too as well?"

Does your daughter have any allergies?? I had a family member swim in my pool last summer (I use strictly bleach) and after a few hours of wearing latex goggles, her eyes swelled up and turned red. It turned out that she is allergic to latex when mixed with chlorine...apparently not too uncommon according to her doctor. Just a thought